Bioinformatics Jobs

Kelly Government Solutions is a strategic supplier and business partner to the federal government and its key suppliers. Through our partnership with the National Institutes of Health, Kelly Government Solutions offers administrative, IT, engineering, scientific, and healthcare professionals the opportunity to work with the leading medical research center in the world. We are seeking a Board Certified (MD or PhD ABMG) Scientist, at the National Institutes of Health (NIH), NIAID! This is a long-term contract position which offers: - Competitive compensation and comprehensive benefit package - Optional health, vision, and dental plans - Vacation leave as well as 11 paid federal holidays and 401K plan. - Access to NIH’s unparalleled resources and niche scientific initiatives SKILLS 1. Experience with high performance and cloud computing 2. Experience with data organization and storage 3. Excellent communication skills and ability to translate complex problems clearly and in... non-technical terms 4. Experience with Next and third generation sequencing data handling and analyzing 5. Excellent organizational skills and ability to decipher and organize large amounts of data 6. Strong interpersonal skills and ability to work in team environment ADDITIONAL QUALIFICATIONS · Master's degree or PhD in Bioinformatics, Computer Science, Computer Engineering, or related field STATEMENT OF WORK DETAILS Provides programming and troubleshooting support to the Federal Government in the dissemination of research data. · Perform quality control on genomic data including next and third generation sequencing long-read sequencing Performs computations on research data analysis. · Perform analyses on next and third generation sequencing Works with staff on scientific programming and experimental design. · Assist staff members in the daily use of data Records observations and report results at weekly laboratory meetings. · Prepare detailed reports for management on incoming and outgoing data · Create SOPs for data transfers and quality control steps Provides statistical support / analysis on research data. · Manage and organize all incoming data files Provides research / service goals in the context of the laboratory's overall mission. · Optimize, organize, and assist in establishing cost-efficient data upload and downloads Evaluates new types of experimental approaches to protocols based on knowledge of scientific literature, available facilities and research needs. · Report and interpret quality control and analyses results · Develop and implement policies for effective data management Independently coordinates the training of personnel in the use of scientific software applications, statistical software applications and programmatic software applications. · Manage and organize data storage for multiple sequencing projects Initiates interdisciplinary collaborations with other research centers. · Collaborate with group members in experiments associated with data collection Deliver at least one presentation per year to audiences outside the Government. · Attend group meetings; present findings; author publications resulting from projects If you are interested in this position please forward your updated resume (in Word/NO formatting) and completed mandatory questioner to irmm679@kellyservices.com. Due to the high volume of inquiries, we regret that we cannot accept phone calls. Even if you aren’t contacted for this position, you are still part of our talent network. All Kelly recruiters have access to your profile, which expands your opportunities even further. As a specialty talent company, Kelly is committed to doing the right thing for our talent and clients. We stand up for equity, inclusion, fair treatment, and opportunity for all as these build the foundation of our Talent Promise. With a focus on safety, value, well-being, investment, and opportunity, Kelly’s Talent Promise confirms our commitment to those in search of a better way to work and live and to help discover what’s next. It is obvious things are different than they were just a few months ago. Kelly is at the forefront of ensuring the safety of our employees in this new working environment. Be well and stay strong. You should know: Vaccination against COVID-19 is a requirement for all job opportunities offered through Kelly Government Solutions, in accordance with the Executive Order on Ensuring Adequate COVID Safety Protocols for Federal Contractors

We are currently searching for a Bioinformatics Scientist to provide bioinformatics related duties to the Cohorts Data Analytics Core. This opportunity is full-time, and it is on site in Bethesda, MD. Duties & Responsibilities • Optimize and maintain best practice pipelines to determine Phenotype Risk Score PheRS and perform PheWAS, LabWAS, TWAS, and similar analyses • Use and maintain large-scale genotype and phenotype databases • Build computable phenotypes for disease, drug effects, and other conditions using combinations of EHR data and survey data • Develop scripts that analyze a variety of health-related data and combine data across different orthogonal data sets, such as EHR data, environment, taxonomical knowledge resources such as OMIM, human phenotype ontology, or Drug bank to aid in genomic analyses • Provide broad-based programming and analytic support for a wide variety of informatic and genomic research projects; write custom scripts to analyze public or data generated... in the laboratory • Provide broad-based programming and analytic support for a wide variety of bioinformatic and research projects • Perform computational analysis of, and interpret results • Maintain proper and detailed documentation of the analysis performed and report results at lab meetings • Provide detailed documentation of custom scripts • Develop or share tools via simple websites • Participate in research design with investigators for determining best practices pertaining to the bioinformatics analysis in new and ongoing projects • Identify new tools and resources for reaching biologically meaningful conclusions • Work on multiple projects concurrently with other laboratory members • Interact and advise other NIH researchers to translate research phenotype and analysis ideas into requirements for projects to be executed within the cohorts that we maintain access • Collaborate with group members in experiments associated with data collection • Attend group meetings; present findings; author publications resulting from projects # SOAR #LI-JR1 Requirements Skills • Experience with one or more general programming languages including but not limiting to: Python, Perl, or Java • Experience in large-scale analyses in the high-performance computing environment or cloud-based environment • Experience in creating data management tracking systems, data and analysis quality control, error-checking procedures, and back-up procedures to prevent loss of data • Ability to quickly convert analysis ideas to implementation, and to multi-task on different projects • Experience with Electronic Health Record (EHR) a plus • Experience with OMOP or FHIR a plus • Experience with All of Us, UK biobank and the eMERGE is a plus (not required) • Ability to use version control systems, such as GitHub is a plus • Ability to use version control systems, such as GitHub is a plus • Experience with OMOP or FHIR a plus • Experience with All of Us, UK biobank and the eMERGE is a plus (not required) • SQL • R • Perl • Java • Python Qualifications • Minimum Education: BA/BS Degree with 3 years of specialized experience, Master’s Degree preferred in Biomedical informatics/Informatics/ Bioinformatics/ Biostatistics/ Computational Biology/Genomics/Computer Science or a related field • At least 3 years of specialized experience with Bachelor’s Degree Due to our contractual requirements and federal orders, including an Executive Order from the White House and an emergency regulation from the Centers for Medicare & Medicaid Services (CMS), the position for which you are applying requires that you provide proof of your vaccination status. If you are unable to receive the COVID-19 vaccine for medical reasons or because of a sincerely held religious belief, you may request an exemption from the vaccination requirement which shall be reviewed after the submission of requested documentation. If an accommodation is granted, the conditions may include weekly testing and masking. All Guidehouse employees also agree to follow any additional health and safety mitigation policies that may be required in the workplace. Company Description Dovel Technologies and its Family of Companies (Medical Science & Computing and Ace Info Solutions) was acquired in October 2021. Guidehouse is a leading global provider of consulting services to the public sector and commercial markets, with broad capabilities in management, technology, and risk consulting. By combining our public and private sector expertise, we help clients address their most complex challenges and navigate significant regulatory pressures focusing on transformational change, business resiliency, and technology-driven innovation. Across a range of advisory, consulting, outsourcing, and digital services, we create scalable, innovative solutions that help our clients outwit complexity and position them for future growth and success. The company has more than 12,000 professionals in over 50 locations globally. Guidehouse is a Veritas Capital portfolio company, led by seasoned professionals with proven and diverse expertise in traditional and emerging technologies, markets, and agenda-setting issues driving national and global economies. Guidehouse is an Equal Employment Opportunity / Affirmative Action employer. All qualified applicants will receive consideration for employment without regard to race, color, national origin, ancestry, citizenship status, military status, protected veteran status, religion, creed, physical or mental disability, medical condition, marital status, sex, sexual orientation, gender, gender identity or expression, age, genetic information, or any other basis protected by law, ordinance, or regulation. Guidehouse will consider for employment qualified applicants with criminal histories in a manner consistent with the requirements of applicable law or ordinance, including the Fair Chance Ordinance of Los Angeles and San Francisco. If you have visited our website for information about employment opportunities or to apply for a position, and you require accommodation, please contact Guidehouse Recruiting at 1-571-633-1711 or via email at RecruitingAccommodation@guidehouse.com. All information you provide will be kept confidential and will be used only to the extent required to provide needed reasonable accommodation. Guidehouse does not accept unsolicited resumes through or from search firms or staffing agencies. All unsolicited resumes will be considered the property of Guidehouse, and Guidehouse will not be obligated to pay a placement fee

JOB OPENING ID: 211089 REGULAR/TEMPORARY: Regular ORGANIZATIONAL GROUP: Medical School DEPARTMENT: MM Otolaryngology - HNS Mission Statement Michigan Medicine improves the health of patients, populations and communities through excellence in education, patient care, community service, research and technology development, and through leadership activities in Michigan, nationally and internationally. Our mission is guided by our Strategic Principles and has three critical components; patient care, education and research that together enhance our contribution to society. Why Join Michigan Medicine? Michigan Medicine is one of the largest health care complexes in the world and has been the site of many groundbreaking medical and technological advancements since the opening of the U-M Medical School in 1850. Michigan Medicine is comprised of over 30,000 employees and our vision is to attract, inspire, and develop outstanding people in medicine, sciences, and healthcare to become one... of the world's most distinguished academic health systems. In some way, great or small, every person here helps to advance this world-class institution. Work at Michigan Medicine and become a victor for the greater good. What Benefits can you Look Forward to? • Excellent medical, dental and vision coverage effective on your very first day • 2:1 Match on retirement savings Responsibilities* Apply knowledge of bioinformatics theory and methods to facilitate the discovery, validation, and implementation of candidate target genes and proteins in cancer diagnosis, prognosis, and therapy for the Michigan Otolaryngology and Translational Oncology Lab (MiOTO). Identify suitable methods for quantitative informatics-driven computing science; make preliminary interpretation of results from analysis of large and complex biological, clinical, and 'omics datasets; determine the consistency of expected results and develop custom pipelines and reproducible analysis workflows for individual projects; manage databases, including conducting statistical and genomic/transcriptomic analysis on several data sets; maintain database for sequencing data and next generation sequencing (NGS) analysis results, integrate next generational delivery service (NGDS) data with Otolaryngology tumor board and RedCap databases; perform database structure and development; identify and adapt emerging software packages and informatics methods for analysis of NGS data; develop novel analysis methods as needed in collaboration with others; mentor bioinformatic trainees; work independently to analyze data derived from projects using NGS technologies; and assemble and organize data, assist in interpretation of results, and prepare data for scientific presentation. Required Qualifications* Requires Master's degree in Bioinformatics + 3 years of bioinformatics experience: programming in Python, PERL, and R languages to understand cancer biology, discover novel therapeutic approaches including precision medicine, and identify drug sensitivities for genomic aberrations common in cancer; developing custom pipelines to analyze viruses in the human genome, including human papilloma virus; and training undergraduate students bioinformatics skills. Background Screening Michigan Medicine conducts background screening and pre-employment drug testing on job candidates upon acceptance of a contingent job offer and may use a third party administrator to conduct background screenings. Background screenings are performed in compliance with the Fair Credit Report Act. Pre-employment drug testing applies to all selected candidates, including new or additional faculty and staff appointments, as well as transfers from other U-M campuses. U-M EEO/AA Statement The University of Michigan is an equal opportunity/affirmative action employer. U-M COVID-19 Vaccination Policy COVID-19 vaccinations, including boosters when eligible, are required for all University of Michigan students, faculty and staff across all campuses, including Michigan Medicine. This includes those working remotely. More information on this new policy is available on the Campus Blueprint website or the UM-Dearborn and UM-Flint websites. Job Detail Job Opening ID 211089 Working Title Bioinformatics Researcher Job Title Bioinfo-Comput Biologist Assoc Work Location Ann Arbor Campus Ann Arbor, MI Full/Part Time Full-Time Regular/Temporary Regular FLSA Status Exempt Organizational Group Medical School Department MM Otolaryngology - HNS Posting Begin/End Date 1/24/2022 - 1/31/2022 Career Interest Research

As part of the team at Thermo Fisher Scientific, you’ll do important work like helping customers in finding cures for cancer, protecting the environment, or making sure our food is safe. Your work will have real-world impact and you’ll be supported in achieving your career goals. With revenues of more than $40 billion and the largest investment in R&D in the industry, we give our people the resources and opportunities to make significant contributions to the world. Location/Division Specific Information The position is based in Ann Arbor, MI and is part of the extended Bioinformatics team within the Clinical Sequencing Division (CSD). The mission of this business unit is to develop next generation sequencing (NGS) based solutions to support research and IVD applications in oncology and other clinical domains. How will you make an impact? NGS is rapidly reshaping life sciences, translational research, and clinical diagnostics. At Thermo Fisher Scientific, a leading contributor in... these fields, we are dedicated to broadening the range of NGS applications with a focus on comprehensive oncology diagnostics. If you are a motivated and innovative bioinformatics scientist seeking to advance your existing expertise in these fields, we would like to invite you to join our NGS R&D Bioinformatics team. What will you do? • Work in close collaboration with other bioinformatics, software, instrument, molecular biology, program management and product management colleagues to build high quality products • Develop complex and custom bioinformatics analyses and algorithms to support development of targeted sequencing assays. • Guide molecular biologists with data interpretation and analysis in areas such as variant calling, CNV detection, RNA fusion detection and genome annotations. • Apply innovative data science approaches to troubleshoot and improve NGS assay performance. • Work independently, prioritize, multi-task, and apply data analysis and problem-solving expertise to develop and improve products targeting important areas of unmet medical need. How will you get here? Education and Experience • PhD in bioinformatics, computer science, mathematics, statistics, or a related field (MS considered for candidates with the right experience). • PhD with 0-3 years experience OR MS with 3-5 years industry experience required • A solid knowledge of next-generation sequencing (NGS) analysis, statistics and data analysis principles as demonstrated by your industry experience or publication history. • Experience with algorithm development and scientific computing, particularly as related to developing bioinformatics analysis methods and algorithms for NGS data. • Proficiency in Python or Perl, MATLAB or R, Linux shell scripting and scientific data visualization. • Effective communication skills, especially for presenting scientific results both internally and externally, keeping records, creating documentation, and working collaboratively in a team of scientists. • Experience or understanding in any of the following areas are also highly desirable: cancer biology, genetics, machine learning, molecular biology, metagenomics, PCR primer design, molecular barcoding. • Direct experience with product development cycles and IVD regulations is a plus

Job Summary Primary accountability is to leverage the organization’s data assets exome sequencing data (>180,000 individuals) from MyCode Community Health Initiative to improve quality, efficiency and generate knowledge specifically in the field of bioinformatics within health research. Performs and supervises complex data extraction, transformation, visualization, and summarization to support Research and operations activities.. Uses data reporting/management tools such as SQL, python, NGS tools (GATK, BWA, VEP, etc.), genomic databases (ClinVar, NCBI, gnomAD, etc.) and contributes to national publications. Uses multiple operating systems (Windows, Linux) and compute environments (local, cloud) and is responsible for assisting in development and maintenance of bioinformatics capabilities. Job Duties • Strategically considers all potential uses for available data, and how to transform disparate data into a useful data. • Provide informatics support in variant screening and... interpretation, including support of translational research projects. • Assist in mining/annotation of genomic and clinical data. A strong understanding of the principles of genetics preferred. • Uses multiple programming languages to develop and maintain bioinformatic pipelines for genomic applications. • Conducts independent quantitative operational, clinical, and financial analysis with clearly summarized findings and recommendations for technical and clinical and non-technical and clinical audiences. • Performs assessments to ensure and understand accuracy, quality, integrity and validity of data and analysis in all work. • When appropriate, translates project specific analysis into ongoing, automated reporting tools including specification preparation, design, testing, validation, analysis, and merging data from various source systems. • Participates in the development, implementation, and enforcement of data management standards and procedures. • Proactively identifies potential outcome analysis, goals of intervention, and basic evaluation structure in the planning phases of research projects. • Provides guidance, feedback, and input in the development of protocols and research proposals. • Performs statistical analysis (SAS or R programming preferred) to evaluate the success of project implementation. • Works closely with all levels of staff, customers and improvement teams to determine analytic needs and requirements; independently develops quantitative approaches to identify opportunities for performance improvement. • Proactively educates the requester of any complexities associated with the data requests. Work is typically performed in an office environment. Accountable for satisfying all job specific obligations and complying with all organization policies and procedures. The specific statements in this profile are not intended to be all-inclusive. They represent typical elements considered necessary to successfully perform the job. Position Details Skills Required: Critical Thinking, Shell Scripting, Linux, SQL, Python, NGS tools, Genomics, Healthcare Industry, Independent Work, Interpersonal Skills, Research Analysis Education Master's Degree-Technology Related Degree (Required) Experience Minimum of 3 years-Healthcare (Required) Certification(s) and License(s) OUR PURPOSE & VALUES: Everything we do is about caring for our patients, our members, our students, our Geisinger family and our communities. KINDNESS: We strive to treat everyone as we would hope to be treated ourselves. EXCELLENCE: We treasure colleagues who humbly strive for excellence. LEARNING: We share our knowledge with the best and brightest to better prepare the caregivers for tomorrow. INNOVATION: We constantly seek new and better ways to care for our patients, our members, our community, and the nation. SAFETY: We provide a safe environment for our patients and members and the Geisinger family We offer healthcare benefits for full time and part time positions from day one, including vision, dental and domestic partners.* Perhaps just as important, from senior management on down, we encourage an atmosphere of collaboration, cooperation and collegiality. We are an Affirmative Action, Equal Opportunity Employer Women and Minorities are Encouraged to Apply. All qualified applicants will receive consideration for employment and will not be discriminated against on the basis of disability or their protected veteran status

The Matsen research group at the Fred Hutchinson Cancer Research Center in Seattle, WA develops and applies methods to learn about evolution and immunology from molecular sequence data. This position will be to develop software in collaboration with the team to answer hard biological questions.They are seeking a Bioinformatics Specialist to join the team. This includes working with the team and collaborators to extract biological knowledge from high-throughput data sets designing and implementing software packages to fill unmet needs in computational biology developing pipelines for reproducible large-scale processing contributing to writing papers. EnvironmentThe Matsen group provides an environment where you can work on interesting problems of real relevance to human health and our understanding of the host/pathogen interface.This is an environment that offers independence and ownership, that aligns your work with your interests and personal goals, that values clean code and... elegant solutions, and that is highly collaborative between postdocs, PhD students, interns, programmers, and collaborators.The Center is housed in a lovely campus on Lake Union a short walk from downtown, and a slightly longer walk from the University of Washington. The Matsen group is in the newly-remodeled Steam Plant building overlooking the lake. We believe that science is for everyone. We have had researchers with a variety of backgrounds and believe in the importance of diversity, equity, and inclusion.Please read our expectations of group members. By applying for this position, we expect that you will fulfill these expectations. We enthusiastically solicit feedback on these expectations or requests for clarification.QualificationsBachelor’s degree in bioinformatics, computational biology, or a related discipline or an equivalent combination of education and related experience.Essential SkillsWe are looking for someone who has: demonstrated coding ability in Python if from a biological background: knowledge of genomics if from a math/stat/CS background: knowledge of the data science Python stack and/or pipeline/workflow automation a desire to produce clean (clear, factored, and tested) code the motivation to learn new topics and improve their craft an ability to work in a team and communicate an ability to find solutions independently interest in the group’s research and is excited to contribute Additional Helpful Skills experience developing in a Linux environment background in statistics experience with a modern git-based workflow Application InstructionsIf you are interested in this position, please submit the following materials (preferably as one PDF): A CV summarizing your education and work experience so far. The names, phone numbers, and email addresses of two references. A code sample showing work that you are proud of. The code sample need not be elaborate, but should demonstrate what you consider to be clean code. This is an important part of the interview because we value code quality, and we hope you do as well. Ideally, it would be publicly accessible (e.g. on GitHub), but if that’s not possible, a zipped attachment is fine too. Physical Requirements: Remaining in a normal seated or standing position for extended periods of time; reaching and grasping by extending hand(s) or arm(s); dexterity to manipulate objects with fingers, for example using a keyboard; communication skills using the spoken word; ability to see and hear within normal parameters; ability to move about workspace. The position requires mobility, including the ability to move materials weighing up to several pounds (such as a laptop computer or tablet). Persons with disabilities may be able to perform the essential duties of this position with reasonable accommodation. Requests for reasonable accommodation will be evaluated on an individual basis. Please Note: This job description sets forth the job’s principal duties, responsibilities, and requirements; it should not be construed as an exhaustive statement, however. Unless they begin with the word “may,” the Essential Duties and Responsibilities described above are “essential functions” of the job, as defined by the Americans with Disabilities Act

DepartmentBSD PED – Section Administrator: Hematology, Oncology, and Stem Cell TransplantationAbout the DepartmentThe Section of Pediatric Hematology/Oncology provides care for patients and families with acute and chronic medical conditions, or other hematologic diseases, requiring the specialty knowledge and skills of Hematology, Oncology and Stem Cell Transplantation.Job SummaryThe Piunti Lab is looking for a Bioinformatics Specialist; the job administers programs and support all phases of bioinformatics activities by helping devise or modify procedures to solve biological complex problems. The Bioinformatics Specialist is responsible for all aspects of research projects and research facilities. Plans and conducts clinical and non-clinical research; facilitates and monitors daily activities of research projects. Directs engineering and technical support activities to develop and maintain tools and computational methods needed to gather and analyze data.Responsibilities Knowledge and... experience in basic and advance analyses of NGS data (ChIP-seq, RNA-seq, ATAC-seq, Hi-C, Bisulfite sequencing, etc.). Participates in creating data algorithms and specialized computer software to identify and classify components of a biological system (i.e. create a pipeline for data analyses and an accessible internal repository for sequencing data). Applies basic application of computational tools and information technology to gather, analyze and visualize data in biology and biomedical research (i.e. generating easy-to-interpret graphs that can be used for publications or presentations at conferences). Interprets data analysis of high throughput genomics, proteomics and genetic data generally concerning chromatin biology projects. Plans own resources to implement or modify existing web-based bioinformatics tools. Designs and perform formal evaluation of informatics methods and products. Manipulates publicly accessible, commercial, or proprietary genomic, proteomic, or post-genomic databases. Performs other related work as needed. Minimum QualificationsEducation:Minimum requirements include a college or university degree in related field.Work Experience:Minimum requirements include knowledge and skills developed through 5-7 years of work experience in a related job discipline.Preferred QualificationsEducation: College or university degree in Biology, Biology or Informatics or related disciplines Master’s degree strongly preferred. Experience: Author of at least one research article where the candidate contributed to bioinformatics analyses. Experience in single cell genomic analyses Working ConditionsLaboratory setting Application Documents Resume (required) Cover letter (preferred) References (preferred) When applying, the document(s) MUST be uploaded via the My Experience page, in the section titled Application Documents of the application.Posting StatementEffective October 15, 2021, the University of Chicago requires COVID vaccination for all students, faculty, and staff members. Individuals may claim exemption from the vaccine requirement for medical or religious reasons.The University of Chicago is an Affirmative Action/Equal Opportunity/Disabled/Veterans Employer and does not discriminate on the basis of race, color, religion, sex, sexual orientation, gender identity, national or ethnic origin, age, status as an individual with a disability, protected veteran status, genetic information, or other protected classes under the law. For additional information please see the University’s Notice of Nondiscrimination. Staff Job seekers in need of a reasonable accommodation to complete the application process should call 773-702-5800 or submit a request via Applicant Inquiry Form. We seek a diverse pool of applicants who wish to join an academic community that places the highest value on rigorous inquiry and encourages a diversity of perspectives, experiences, groups of individuals, and ideas to inform and stimulate intellectual challenge, engagement, and exchange. All offers of employment are contingent upon a background check that includes a review of conviction history. A conviction does not automatically preclude University employment. Rather, the University considers conviction information on a case-by-case basis and assesses the nature of the offense, the circumstances surrounding it, the proximity in time of the conviction, and its relevance to the position

Labcorp is recruiting a Senior Bioinformatics Specialist/Scientist for a dynamic team in either Westborough, MA, Raleigh, NC or Atlanta, GA. This position can also be Remote based. She/He will improve understanding of biological measurements and assay performance, to design, develop and extend algorithms for extracting and interpreting relevant information from clinical specimens. Responsibilities • Collects, manages, and studies biological data especially genomic and at the molecular level by using computer software and hardware with data mining and knowledge engineering as appropriate to the purpose • Collaborates with R&D scientists on the development of new assays, measurement technologies and tests for evaluating clinical conditions. • Performs statistical and bioinformatics analyses of experimental data produced by clinical testing instruments such as DNA sequencers, qPCR and other molecular instruments • Conducts data mining over internally produced and publicly available... data sets • Provides analysis information to management to aid in decision making on the development of new laboratory developed tests or improvement of existing test. • Provides bioinformatics support for the commercial molecular diagnostics • Develops or improves data analysis pipelines necessary for processing of large datasets • Develops or improves interpretation pipelines for variant scoring and reporting 21-91257 Covance is proud to be an Equal Opportunity Employer: As an EOE/AA employer, the organization will not discriminate in its employment practices due to an applicant's race, age, color, religion, sex, national origin, sexual orientation, gender identity, disability or veteran status

Company Description Guardant Health is a leading precision oncology company focused on helping conquer cancer globally through use of its proprietary blood tests, vast data sets and advanced analytics. The Guardant Health Oncology Platform leverages capabilities to drive commercial adoption, improve patient clinical outcomes and lower healthcare costs across all stages of the cancer care continuum. Guardant Health has launched liquid biopsy-based Guardant360®, Guardant360 CDx and GuardantOMNI® tests for advanced stage cancer patients. These tests fuel development of its LUNAR program, which aims to address the needs of early stage cancer patients with neoadjuvant and adjuvant treatment selection, cancer survivors with surveillance, asymptomatic individuals eligible for cancer screening and individuals at a higher risk for developing cancer with early detection. To enable Guardant Health to fight cancer through data, the minimal residual disease (MRD) detection bioinformatics team is... seeking a highly motivated Summer Intern – Bioinformatics to join our team to improve free text clinical data parsing and examine the correlations between clinical metadata and detected genomic/epigenomic signals. At Guardant, we leverage the most advanced technologies and work with leaders in many different fields to create the most impactful and meaningful technologies for cancer management. At Guardant Health, you will be at the forefront of combining molecular biology with machine learning and software to improve patient care. You will interact with a diverse team of bioinformaticians, biologists, and software engineers to develop software and analyze data in a collaborative and fast-paced environment. Essential Duties and Responsibilities: • Develop methods to automate parsing of free-text clinical data • Learn how Guardant detects genomic and epigenomic signal from a blood test • Analyze correlation between clinical metadata and various sample features • Participate in technical discussions Qualifications • Experience writing Python • Familiar with relational databases and SQL • Some understanding of cancer genomics and molecular biology • Experience with natural language processing is a plus Education: Students close to or recently completing BS, MS in Bioinformatics, CS, or a related field with some programming experience. Additional Information Covid Vaccination Policy: Starting January 7, 2022, Guardant Health will require all employees to be fully vaccinated to either (a) establish that they have been fully vaccinated against COVID-19; or (b) request and obtain an approved exemption from Guardant’s COVID-19 U.S. Vaccination Policy as a reasonable accommodation, as consistent with applicable laws. An employee is considered fully vaccinated against COVID-19 two weeks after receiving the second dose of a two-dose vaccine or one dose of a single-dose vaccination. Acceptable vaccines are approved or under emergency use authorization by the U.S. Food and Drug Administration (FDA) and/or the World Health Organization (WHO). In addition, fully-vaccinated employees will be required to maintain their fully-vaccinated status under this policy by obtaining, if applicable, any FDA-approved boosters. Employee may be required to lift routine office supplies and use office equipment. Majority of the work is performed in a desk/office environment; however, there may be exposure to high noise levels, fumes, and biohazard material in the laboratory environment. Ability to sit for extended periods of time. Guardant Health is an Equal Opportunity Employer. All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, or protected veteran status and will not be discriminated against on the basis of disability. All your information will be kept confidential according to EEO guidelines. To learn more about the information collected when you apply for a position at Guardant Health, Inc. and how it is used, please review our Privacy Notice for Job Applicants. Please visit our career page at: {removed}/jobs

Basepair develops SaaS to manage, analyze and interpret next generation sequencing (NGS) data. Scientists and physicians working in molecular diagnostics, biopharma, assay development at top universities like Harvard, Stanford, NYU, UCSD, etc. use Basepair to make breakthrough medical discoveries and provide better medical care to patients. Founded by a scientist from Harvard Medical School, Basepair is driven by the mission to use technology to improve healthcare. Our team is analytical, fast-paced and informal. We are funded by venture capital and NIH, and we are growing rapidly. We are looking for a technically skilled and detail-oriented scientist to join our bioinformatics team remotely. Your goal is to develop, validate and update best-in-class NGS pipelines. You will communicate with existing and prospective users to answer questions about our software, perform custom analyses, and help guide strategic scientific direction for Basepair. You will be the face of Basepair's... bioinformatics expertise, conducting webinars, publishing content, etc. Requirements • Develop, validate and update best-practices pipelines for variant calling, gene expression, epigenetics, single cell RNA-Seq, etc. • Have knowledge of public datasets and consortiums • Perform custom bioinformatics analysis for users • Conduct webinar, QnA, etc. to introduce NGS pipelines to bench scientists • Write white papers and blogs • Represent Basepair at conferences and meetings What you will need for this position • Masters or PhD with 3+ years of experience in bioinformatics, computational biology or related field • 2+ years of experience of building NGS pipelines • 2+ years of Python programming, data visualization, ability to read and modify other people's source code • Proficiency in Linux, setting up servers, installing packages, bash scripting, etc. • Ability to work independently, prioritize tasks and manage your time productively • Excellent communication skills, including scientific writing Additional Desired Qualifications • Experience with cloud computing (AWS), docker, etc • Proficiency in R • Experience with CWL, WDL • Expertise with front end software development using JavaScript, e.g., React, d3.js, etc. • Familiarity with molecular biology and NGS library preparation techniques • Previous startup and remote work experience is a plus Benefits This is an opportunity to make a significant impact at an early stage startup. We're a small team working closely together to make people's lives better! Your voice will be heard and you will have the autonomy to set your vision. We strongly encourage ongoing learning to be the best in your position. We provide a competitive salary, meaningful equity, excellent healthcare and other benefits. While half the team works out of our New York office, we are a remote-friendly company. We want to hire the best talent, and people who work at Basepair can live and work from anywhere they want